{"id":157,"date":"2018-09-12T17:47:03","date_gmt":"2018-09-13T00:47:03","guid":{"rendered":"http:\/\/labs.wsu.edu\/ecology\/?page_id=157"},"modified":"2026-03-05T10:19:17","modified_gmt":"2026-03-05T18:19:17","slug":"pubs","status":"publish","type":"page","link":"https:\/\/labs.wsu.edu\/ecology\/splashdown\/pubs\/","title":{"rendered":"Publications"},"content":{"rendered":"
\r\n\t\nLabs Network Sites<\/span><\/a><\/span> > Riverine [Ecosystem] Ecology Lab (REEL)<\/span><\/a><\/span><\/div>
\r\n\t

\r\n\t\tPapers We’ve Produced\t<\/h1>\r\n\t\t<\/header>\r\n\n\n\n

Jonsson, A, J Haider, L Pereira, A Fremier, C Folke, M Teng\u00f6, LJ Gordon. (2024). Nurturing gastronomic landscapes for biosphere stewardship<\/a>. Global Food Security<\/em>. 42:100789.<\/p>\n\n\n\n

Auerbach, DS* and AK Fremier. (2024) Bias and variation in salmonid redd counting using remotely piloted vehicles<\/a>. River Research and Applications.<\/em><\/p>\n\n\n\n

Mohamed A, Verburg P, Obura D, Abrams J, Zafra-Calvo N, Rocha J, Estrada-Carmona N, Fremier AK, Jones SK, Meier I, Stewart-Koster, B. 2024. Securing Nature\u2019s Contributions to People requires at least 20%\u201325%(semi-) natural habitat in human-modified landscapes<\/a>. OneEarth<\/em> 7(1), 59-71<\/p>\n\n\n\n

Joyal*, T, AK Fremier, J Boll. (2023). Modeled forest conversion influences humid tropical watershed hydrology more than projected climate change<\/a>. Hydrological Processes<\/em>. 10(8), 160<\/p>\n\n\n\n

Stahl*, AT and AK Fremier. (2023). Translatability of water governance experiments across settings and scales<\/a>. Ecology & Society<\/em>. 28(1). Special Issue: Adaptive Governance.<\/p>\n\n\n\n

Auerbach*, DS and AK Fremier. (2022). Surveying fish redds with drones shows consistently higher counts than field methods<\/a>. River Research and Applications<\/em>. 39(1): 35-45<\/p>\n\n\n\n

Keeley, A.T.H., Fremier, A.K., Goertler, P.A.L., Huber, P.R., Sturrock, A.M., Bashevkin, S.M., et al.<\/em> (2022). Governing Ecological Connectivity in Cross-Scale Dependent Systems<\/a>. BioScience. <\/p>\n\n\n\n

Stahl, A.T., Fremier, A.K., Heinse, L. (2021). Cloud-Based Environmental Monitoring to Streamline Remote Sensing Analysis for Biologists<\/a>. Bioscience 71(12): 1249\u20131260.<\/p>\n\n\n\n

DeClerck, FAJ, Izabella Koziell, Aman Sidhu, Jonathan Wirths, Tim Benton, Lucas A Garibaldi, Claire Kremen, Martine Maron, C Rumbaitis del Rio, Michael Clark, Chris Dickens, Natalia Estrada-Carmona, Alexander K Fremier, Sarah K Jones, Colin K Khoury, Rattan Lal, Michael Obersteiner, Roseline Remans, A Rusch, LA Schulte, J Simmonds, LC Stringer, C Weber, L Winowiecki. (2021). Biodiversity and agriculture: rapid evidence review<\/a>. International Water Management Institute (IWMI). CGIAR Research Program on Water, Land and Ecosystems (WLE).<\/p>\n\n\n\n

DeClerck, F.A.J.; Koziell, I.; Benton, T.; Garibaldi, L.A.; Kremen, C.; Maron, M.; Rumbaitis Del Rio, C.; Sidhu, A.; Wirths, J.; Clark, M.; Dickens, C.; Carmona, N.E.; Fremier, A.K.; Jones, S.K.; Khoury, C.K.; Lal, R.; Obersteiner, M.; Remans, R.; Rusch, A.; Schulte, L.A.; Simmonds, J.; Stringer, L.C.; Weber, C.; Winowieck, L. (2021) A whole earth approach to nature positive food: biodiversity and agriculture<\/a>. Bonn (Germany): Center for Development Research (ZEF) in cooperation with the Scientific Group for the UN Food System Summit 2021. 26 p.<\/p>\n\n\n\n

Hutchinson, R.A., A.K. Fremier and J.H. Viers. (2020). Restoring hydrologic connectivity on river floodplains suppresses long term dominance of an invasive species<\/a>. Restoration Ecology. 28(6) 1551-1560.<\/p>\n\n\n\n

Welsh K, Keesecker L, Hill R, Joyal T, Boll J, Bosque-P\u00e9rez NA, Cosens BA, Fremier AK. (2020). Scale mismatch in social\u2013ecological systems: A Costa Rican case study of spring water management<\/a>. Sustainable Water Resources Management 6(40): 1-12.<\/p>\n\n\n\n

Stahl, A. T., A. K. Fremier and B. A. Cosens. (2020). Mapping legal authority for terrestrial conservation corridors along streams<\/a>. Conservation Biology. 34 (4), 943-955<\/p>\n\n\n\n

Fremier, A. K., Strickler, K. M., Parzych, J., Powers, S., & Goldberg, C. S. (2019). Stream Transport and Retention of Environmental DNA Pulse Releases in Relation to Hydrogeomorphic Scaling Factors<\/a>. Environmental Science and Technology, 53(12), 6640\u20136649.<\/p>\n\n\n\n

Mejia, F. H., Fremier, A. K., Benjamin, J.R., Bellmore, J.R., Grimm, A.Z., Watson, G. A., & Newsom, M. (2019). Stream metabolism increases with drainage area and peaks asynchronously across a stream network<\/a>. Aquatic Sciences, 81(1), 9.<\/p>\n\n\n\n

Goldberg, C. S., Strickler, K. M., & Fremier, A. K. (2018). Degradation and dispersion limit environmental DNA detection of rare amphibians in wetlands: Increasing efficacy of sampling designs<\/a>. Science of the Total Environment, 633, 695\u2013703.<\/p>\n\n\n\n

Fremier, A. K., Yanites, B. J., & Yager, E. M. (2018). Sex that moves mountains: The influence of spawning fish on river profiles over geologic timescales<\/a>. Geomorphology, pp. 163\u2013172.  Special Issue on Geomorphology and Resilience for the Binghamton Geomorphology Symposium 2017.<\/p>\n\n\n\n

Wood, S. L. R., Jones, S. K., Johnson, J. A., Brauman, K. A., Chaplin-Kramer, R., Fremier, A., \u2026 DeClerck, F. A. (2018). Distilling the role of ecosystem services in the Sustainable Development Goals<\/a>. Ecosystem Services, 29, 70\u201382.<\/p>\n\n\n\n

Estrada-Carmona, N., Harper, E. B., DeClerck, F., & Fremier, A. K. (2017). Quantifying model uncertainty to improve watershed-level ecosystem service quantification: a global sensitivity analysis of the RUSLE<\/a>. International Journal of Biodiversity Science, Ecosystem Services and Management, 13(1), 40\u201350.<\/p>\n\n\n\n

Gunderson, L., Cosens, B. A., Chaffin, B. C., Arnold, C. A. (Tom), Fremier, A. K., Garmestani, A. S., \u2026 Llewellyn, D. (2017). Regime shifts and panarchies in regional scale social-ecological water systems<\/a>. Ecology and Society, 22(1), art31.  SPECIAL ISSUE FROM OUR SESYNC GROUP<\/p>\n\n\n\n

Jones, S. K., Fremier, A. K., DeClerck, F. A., Smedley, D., Pieck, A. O., & Mulligan, M. (2017). Big data and multiple methods for mapping small reservoirs: Comparing accuracies for applications in agricultural landscapes<\/a>. Remote Sensing, 9(12).<\/p>\n\n\n\n

Craig, R. K., Garmestani, A. S., Allen, C. R., Arnold, C. A. (Tony), Birg\u00e9, H., DeCaro, D. A., \u2026 Schlager, E. (2017). Balancing stability and flexibility in adaptive governance: An analysis of tools available in U.S. environmental law<\/a>. Ecology and Society, 22(2), art3.  SPECIAL ISSUE FROM OUR SESYNC GROUP<\/p>\n\n\n\n

Ortega-Pieck, A., Fremier, A. K., & Orr, C. H. (2017). Agricultural influences on the magnitude of stream metabolism in humid tropical headwater streams<\/a>. Hydrobiologia, 1\u201316.<\/p>\n\n\n\n

Smith, M. E., Henkel, T. W., Williams, G. C., Aime, M. C., Fremier, A. K., & Vilgalys, R. (2017). Investigating niche partitioning of ectomycorrhizal fungi in specialized rooting zones of the monodominant leguminous tree Dicymbe corymbosa<\/a>. New Phytologist, 215(1), 443\u2013453.<\/p>\n\n\n\n

Abelleira Mart\u00ednez, OJ, AK Fremier, Z Ramos-Benda\u00f1a, SM Galbraith, S G\u00fcnter, L Vierling, NA Bosque-P\u00e9rez, and JC Ordo\u00f1ez. 2016. Scaling-up spatial variation in functional traits to inform ecosystem service management: assumptions and methods. Ecology and Evolution 6(13): 4359-4371<\/p>\n\n\n\n

DeClerck, F., S. Jones, S. Attwood, D. Bossio, E. Girvetz, B. Chaplin-Kramer, E. Enfors, A. Fremier, L. Gordon, F. Kizito, I. Lopez Noriega, N. Matthews, M. McCartney, M. Meacham, A. Noble, M. Quintero, R. Remans, R. Soppe, L. Willemen, S. Wood, and W. Zhang. 2016. Agricultural ecosystems and their services: the vanguard of sustainability? Current Opinion in Environ. Sustainability 23:92\u201399.<\/p>\n\n\n\n

Goldberg, C S, Turner, CR, Deiner, K, Klymus, KE, Thomsen, PF, Murphy, MA, Spear, SF, McKee, A, Oyler-McCance, SJ, Cornman, RS, Laramie, MB, Mahon, AR, Lance, RF, Pilliod, DS, Strickler, KM, Waits, LP, Fremier, AK, Takahara, T, Herder, JE and Taberlet, P 2016. Critical considerations for the application of environmental DNA methods to detect aquatic species. Methods Ecology Evol. 7: 1299\u20131307<\/p>\n\n\n\n

Mejia, F.H. C.V. Baxter, E.K. Berntsen, and A.K Fremier. 2016. Linking groundwater-surface water exchange to food production and salmonid growth. Canadian Journal of Fisheries and Aquatic Sciences. 73(11): 1650-1660 [Special Issue on Resource Subsidies]<\/p>\n\n\n\n

Benson, M.H., Lippitt, C.D., Morrison, R., Cosens, B., Boll, J., Chaffin, B.C., Fremier, A.K., Heinse, R., Kauneckis, D., Link, T.E., Scruggs, C.E., Stone, M., Valentin, V. 2015. Five ways to support interdisciplinary work before tenure. Journal of Environmental Studies and Science<\/p>\n\n\n\n

Buxton, T.H., Buffington, J.M., Yager, E.M., Hassan, M.A., Fremier, A.K., 2015. The relative stability of salmon redds and unspawned streambeds. Water Resources Research 51, 6074\u20136092.<\/p>\n\n\n\n

Buxton, T.H., Buffington, J.M., Tonina, D., Fremier, A.K., Yager, E.M., Post, J., 2015. Modeling the influence of salmon spawning on hyporheic exchange of marine-derived nutrients in gravel stream beds. Canadian Journal of Fisheries and Aquatic Sciences 72, 1146\u20131158.<\/p>\n\n\n\n

Cosens, B., A.K. Fremier, and N. Bankes. Chapter 14: The Columbia River Treaty and the dynamics of transboundary water negotiations in a changing environment: How might climate change alter the game? Invited book chapter. Western Water Policy and Planning in a Variable and Changing Climate. Eds. Kathleen Miller, Alan Hamlet, Douglas Kenney, Kelley Remond<\/p>\n\n\n\n

Fremier, A.K, M. Kiparsky, S. Gmur, J. Aycrigg, L. Svancara, R. Kundis Craig, B. Cosens, D Goble, F. Davis and J.M. Scott. 2015. A riparian conservation network for ecological resilience. Biological Conservation 191: 29-37<\/p>\n\n\n\n

Strickler, K.M., Fremier, A.K., Goldberg, C.S. 2015. Quantifying effects of UV, temperature, and pH on degradation rates of eDNA in an aquatic microcosm. Biological Conservation 183: 85-92<\/p>\n\n\n\n

Bellmore, J.R., A.K. Fremier, F.H. Mejia, and M. Newsom. 2014. A mechanism-based trophic productivity model to simulate periphyton growth. Freshwater Biology 59(7): 1437-1451<\/p>\n\n\n\n

Cosens, B. and A.K. Fremier. Assessing system resilience and ecosystem services in large river basins: a case study of the Columbia River Basin. 2014 Natural Resources Environmental Law. 51 Idaho Law Review 91.<\/p>\n\n\n\n

Fremier, A.K., Girvetz, E.H., Greco, S.E., & Larsen, E.W. 2014. Quantifying process-based mitigation strategies in historical context: separating multiple cumulative effects on river meander migration. PLoS One. 9(6), e99736. doi:10.1371\/journal.pone.0099736<\/p>\n\n\n\n

Niemeyer, R.N., AK Fremier, R. Heinse, W. Ch\u00e1vez Huam\u00e1n, and FA DeClerck. 2014. Woody vegetation increases saturated hydraulic conductivity in dry tropical Nicaragua. Vadose Zone. 13(1)<\/p>\n\n\n\n

Hegg, JC**, BP Kennedy, and AK Fremier. 2013. Predicting strontium isotope variation and fish location with bedrock geology: Understanding the effects of geologic heterogeneity. Chemical Geology. 360: 89-98<\/p>\n\n\n\n

Fremier, AK, FA DeClerck, N. Bosque-Perez, N. Estrada Carmona, R. Hill, T. Joyal, L Keesecker, PZ Klos, A Martinez-Salinas, R Niemeyer, A Sanfiorenzo, K Welsh, and J. D. Wulfhorst. 2013. Understanding spatiotemporal lags in ecosystem services to improve incentives. BioScience. 63(6):472-482<\/p>\n\n\n\n

Smith, M.E., T. Henkel, J. Uehling, A.K. Fremier, Clarke, and R. Vilgalys. 2013. The ectomycorrhizal fungal community in a tropical forest dominated by the neotropical dipterocarp Pakaraimaea dipterocarpacea. PloS One.<\/p>\n\n\n\n

Viers, J.H., A.K. Fremier, R.A. Hutchinson, J.H. Thorne, J.A. Quinn, and M.G. Vaghti. 2012. Patterns of regional and local riparian plant diversity in the California Sacramento – San Joaquin Valley. Restoration Ecology 20(2):160-168.<\/p>\n\n\n\n

Fremier, A.K. and K.M. Strickler. 2011. Topics in river structure and function. BioScience. Introduction to selected paper compilation.<\/p>\n\n\n\n

Harper, E.B., J.C. Stella, and A.K. Fremier. 2011. Using ecologically meaningful sensitivity analyses to quantify complex model uncertainty: A case study of Fremont cottonwood (Populus fremontii) population dynamics. Ecological Applications. 21(4):1225-1240.<\/p>\n\n\n\n

Smith, M. E., T. W. Henkel, M. C. Aime, A. K. Fremier, and R. Vilgalys. 2011. Ectomycorrhizal fungal diversity and community structure on three co-occurring leguminous canopy tree species in a Neotropical rainforest New Phytologist, 192(3), 699\u2013712<\/p>\n\n\n\n

Stella, J.C., M.K. Hayden, J.J. Battles, H. Pi\u00e9gay, S. Dufour, A.K. Fremier. 2011. The critical role of abandoned channels in sustaining pioneer riparian forest ecosystems. Ecosystems 14(5) 776-790.<\/p>\n\n\n\n

Fremier, A.K., J.I. Seo, and F. Nakamura. 2010. Downstream connectivity and fluvial export of large wood: dynamic patterns and processes in the river corridor. Geomorphology 117:33-43.<\/p>\n\n\n\n

Savage, W.K., A.K. Fremier, and H.B. Shaffer. 2010. Within-population processes override the signal of a landscape influence on genetic structure of the southern long-toed salamander. Molecular Ecology. 19: 3301-3314.<\/p>\n\n\n\n

Fremier, A.K., and T.S. Talley. 2009. Scaling riparian conservation efforts with river hydrology: lessons from blue elderberry distributions along four central California rivers. Wetlands 29:150-162.<\/p>\n\n\n\n

Smith, M.E., G.W. Douhan, A.K. Fremier, and D.M. Rizzo. 2009. Are true multihost fungi the exception or the rule? Dominant ectomycorrhizal fungi Pinus sabiniana differ from those on co-occurring Quercus species. New Phytologist. 128:295-299<\/p>\n\n\n\n

Vaghti, M.G., M. Holyoak, A. Williams, T.S. Talley, A.K. Fremier, and S.E. Greco. 2009. Understanding the ecology of blue elderberry to inform landscape restoration in semi-arid river corridors. Environmental Management 43: 28-43.<\/p>\n\n\n\n

Larsen, E.W., E.H. Girvetz, and A.K. Fremier. 2007. Landscape level planning in alluvial riparian floodplain ecosystems: using geomorphic modeling to avoid conflicts between human infrastructure and habitat conservation. Landscape and Urban Planning 79:338-346.<\/p>\n\n\n\n

Greco, S.E., A.K. Fremier, R.E. Plant, and E.W. Larsen. 2007. A method to track surficial patterns of floodplain chronology on a large meandering river: Analysis of land production rates and riparian vegetation distribution over land age gradients. Landscape and Urban Planning 81:354-373.<\/p>\n\n\n\n

Larsen, E. W., A. K. Fremier, and E. H. Girvetz. 2006. Modeling the effects of variable annual flow on river channel meander migration patterns, Sacramento River, California, USA. Journal of the American Water Resources Association 42:1063-1075.<\/p>\n\n\n\n

Larsen, E. W., A. K. Fremier, and S. E. Greco. 2006. Cumulative effective stream power and bank erosion on the Sacramento River, California, USA. Journal of the Amer. Water Resources Association 42:1077-1097.<\/p>\n\n\n\n

Larsen, E.W., E.H. Girvetz, and A.K. Fremier. 2006. Assessing the effects of alternative setback channel constraint scenarios employing a river meander migration model. Environmental Management 37:880-897.<\/p>\n","protected":false},"excerpt":{"rendered":"

Jonsson, A, J Haider, L Pereira, A Fremier, C Folke, M Teng\u00f6, LJ Gordon. (2024). Nurturing gastronomic landscapes for biosphere stewardship. Global Food Security. 42:100789. Auerbach, DS* and AK Fremier. (2024) Bias and variation in salmonid redd counting using remotely piloted vehicles. River Research and Applications. Mohamed A, Verburg P, Obura D, Abrams J, Zafra-Calvo […]<\/p>\n","protected":false},"author":1153,"featured_media":0,"parent":4,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"wsuwp_university_location":[],"wsuwp_university_org":[],"_links":{"self":[{"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/pages\/157"}],"collection":[{"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/users\/1153"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/comments?post=157"}],"version-history":[{"count":23,"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/pages\/157\/revisions"}],"predecessor-version":[{"id":1080,"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/pages\/157\/revisions\/1080"}],"up":[{"embeddable":true,"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/pages\/4"}],"wp:attachment":[{"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/media?parent=157"}],"wp:term":[{"taxonomy":"wsuwp_university_location","embeddable":true,"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/wsuwp_university_location?post=157"},{"taxonomy":"wsuwp_university_org","embeddable":true,"href":"https:\/\/labs.wsu.edu\/ecology\/wp-json\/wp\/v2\/wsuwp_university_org?post=157"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}