{"id":129,"date":"2025-03-10T12:20:29","date_gmt":"2025-03-10T19:20:29","guid":{"rendered":"https:\/\/labs.wsu.edu\/lange-lab\/?page_id=129"},"modified":"2025-04-04T10:46:09","modified_gmt":"2025-04-04T17:46:09","slug":"spektraris-a-collection-of-tools-for-identifying-plant-natural-products","status":"publish","type":"page","link":"https:\/\/labs.wsu.edu\/lange-lab\/spektraris-a-collection-of-tools-for-identifying-plant-natural-products\/","title":{"rendered":"Spektraris: A collection of tools for identifying plant natural products"},"content":{"rendered":"\n<p class=\" wsu-font-size--medium\">Spektraris currently consists of two databases. An LC-MS Accurate Mass &#8211; Time tag (AMT) database, and an NMR database.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\">Resources<\/h2>\n\n\n\n<p class=\" wsu-font-size--medium\"><a href=\"http:\/\/langelabtools.wsu.edu\/amt\/\">Spektraris AMT Database<\/a>&nbsp;&#8211; Resource for searching LC-MS data againast a database of plant natural products.<\/p>\n\n\n\n<p class=\" wsu-font-size--medium\"><a href=\"http:\/\/langelabtools.wsu.edu\/nmr\">Spektraris NMR Database&nbsp;<\/a>&nbsp;&#8211; Resource for searching&nbsp;<sup>1<\/sup>H and&nbsp;<sup>13<\/sup>C NMR data against a database of plant natural products, currently focused on compounds related to Paclitaxel.<br><\/p>\n\n\n\n<h2 class=\"wp-block-heading\"><strong>References<\/strong><\/h2>\n\n\n\n<p class=\" wsu-font-size--medium\">Cuthbertson D.J., Johnson S.R., Piljac-Zegarac J., Kappel J., Schafer S., Wust M., Ketchum R.E., Croteau, R.B., Marques J.V., Davin L.B., Lewis N.G., Rolf M., Kutchan T.M., Soejarto D.D., Lange B.M. (2013) Accurate mass-time tag library for LC\/MS-based metabolite profiling of medicinal plants. <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/23597491\/\"><em>Phytochemistry<\/em> Jul:91:187-97<\/a>.<\/p>\n\n\n\n<p class=\" wsu-font-size--medium\">Lange B.M. (2016) Online resources for gene discovery and biochemical research with aromatic and medicinal plants.<a href=\"https:\/\/link.springer.com\/article\/10.1007\/s11101-015-9450-0\"> <em>Phytochemistry Rev<\/em>. Jan:15:489-510<\/a>.<\/p>\n\n\n\n<p class=\" wsu-font-size--medium\">Fischedick J.T., Johnson, S.R., Ketchum, R.E., Croteau, R.B., Lange, B.M. (2015) NMR spectral search module for Spektraris, an online resource for plant natural product identification &#8211; taxane diterpenoids from Taxus x media cell suspension cultures as a case study. <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/25534952\/\"><em>Phytochemistry<\/em> 113, 87-95<\/a>.<\/p>\n\n\n\n<p class=\" wsu-font-size--medium\">Johnson S.R., Lange B.M. (2015) Open-access metabolomics databases for natural product research: present capabilities and future potential. <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/25789275\/\"><em>Frontiers Bioeng. Biotechnol<\/em>. 4:3:22<\/a>.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\"><strong>Contact<\/strong><\/h2>\n\n\n\n<p class=\" wsu-font-size--medium\">Please direct questions or comments about this website or the Spektraris tool to the website administrator:&nbsp;<a href=\"mailto:lange-m@wsu.edu\">Mark Lange<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Spektraris currently consists of two databases. An LC-MS Accurate Mass &#8211; Time tag (AMT) database, and an NMR database. Resources Spektraris AMT Database&nbsp;&#8211; Resource for searching LC-MS data againast a database of plant natural products. Spektraris NMR Database&nbsp;&nbsp;&#8211; Resource for searching&nbsp;1H and&nbsp;13C NMR data against a database of plant natural products, currently focused on compounds [&hellip;]<\/p>\n","protected":false},"author":44101,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"categories":[],"tags":[],"wsuwp_university_location":[],"wsuwp_university_org":[],"_links":{"self":[{"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/pages\/129"}],"collection":[{"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/users\/44101"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/comments?post=129"}],"version-history":[{"count":5,"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/pages\/129\/revisions"}],"predecessor-version":[{"id":171,"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/pages\/129\/revisions\/171"}],"wp:attachment":[{"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/media?parent=129"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/categories?post=129"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/tags?post=129"},{"taxonomy":"wsuwp_university_location","embeddable":true,"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/wsuwp_university_location?post=129"},{"taxonomy":"wsuwp_university_org","embeddable":true,"href":"https:\/\/labs.wsu.edu\/lange-lab\/wp-json\/wp\/v2\/wsuwp_university_org?post=129"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}