{"id":493,"date":"2022-09-29T18:52:45","date_gmt":"2022-09-30T01:52:45","guid":{"rendered":"http:\/\/labs.wsu.edu\/pmrg\/?page_id=493"},"modified":"2022-09-29T19:10:41","modified_gmt":"2022-09-30T02:10:41","slug":"des_lignin","status":"publish","type":"page","link":"https:\/\/labs.wsu.edu\/pmrg\/resources\/des_lignin\/","title":{"rendered":"des_lignin"},"content":{"rendered":"<section id=\"builder-section-1663969019160\" class=\"row single h1-header gutter pad-top\">\n<div style=\"\" class=\"column one \">\n<h1>Molecular structural dataset of Deep Eutectic Solvent lignin: A computational simulation study<\/h1>\n<\/p><\/div>\n<\/section>\n<section id=\"builder-section-1663969095462\" class=\"row single gutter pad-top\">\n<div style=\"\" class=\"column one \">\n<p>&nbsp;<\/p>\n<p>Dataset of smaller lignin molecules with DP between 1 to 5, generated by simulating Deep Eutectic Solvent (DES) delignification using a computational simulation model. The simulation model derives the outcome of \u03b2-O-4 ether bond cleavage with acidic DES (Choline Chloride \/ Lactic acid) elucidating experimentally observed structural characteristics.<\/p>\n<p><img decoding=\"async\" loading=\"lazy\" class=\"wp-image-495 alignleft\" src=\"https:\/\/s3.wp.wsu.edu\/uploads\/sites\/2775\/2022\/09\/Picture1.png\" alt=\"\" width=\"667\" height=\"271\" srcset=\"https:\/\/wpcdn.web.wsu.edu\/wp-labs\/uploads\/sites\/2775\/2022\/09\/Picture1.png 593w, https:\/\/wpcdn.web.wsu.edu\/wp-labs\/uploads\/sites\/2775\/2022\/09\/Picture1-396x161.png 396w\" sizes=\"(max-width: 667px) 100vw, 667px\" \/><\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<div><\/div>\n<div><\/div>\n<div><\/div>\n<div class=\"hdr1\"><strong>Download<\/strong><\/div>\n<div class=\"pfont\">You can download the DES lignin dataset using the links below. Molecular representations are stored in canonized SMILES format. To see the structures in drawing format, we suggest any chemical structure viewer that can be visualized using SMILES \/ SDF files such as <a href=\"https:\/\/chemdrawdirect.perkinelmer.cloud\/js\/sample\/index.html\">ChemDraw online<\/a>\u00a0for 2D structure and\u00a0<a href=\"https:\/\/avogadro.cc\/\">Avogadro<\/a>\u00a0for 3D visualization.<\/div>\n\n<table id=\"tablepress-7\" class=\"tablepress tablepress-id-7\">\n<thead>\n<tr class=\"row-1 odd\">\n\t<th class=\"column-1\">FILE TYPE<\/th><th class=\"column-2\">DESCRIPTION<\/th><th class=\"column-3\">LINK<\/th><th class=\"column-4\">SIZE<\/th>\n<\/tr>\n<\/thead>\n<tbody class=\"row-hover\">\n<tr class=\"row-2 even\">\n\t<td class=\"column-1\">DESL dataset<\/td><td class=\"column-2\">Simulated molecular structure of DES lignin. <br> Molecular structural representation of smaller molecules with DP 1 to 5. <\/td><td class=\"column-3\"><a href=\"https:\/\/s3.wp.wsu.edu\/uploads\/sites\/2775\/2022\/09\/df_data_desl.csv\" rel=\"noopener\" target=\"_blank\"><b>CSV file<\/b><\/a><\/td><td class=\"column-4\">2.35MB<\/td>\n<\/tr>\n<tr class=\"row-3 odd\">\n\t<td class=\"column-1\">Simulation algorithm<\/td><td class=\"column-2\">Simulation model is implemented using Python and  RDKit (open-source cheminformatics toolkit) <\/td><td class=\"column-3\"><a href=\"https:\/\/s3.wp.wsu.edu\/uploads\/sites\/2775\/2022\/09\/desl-simulation.zip\"><b>Jupyter notebook<\/b><\/a><\/td><td class=\"column-4\">70KB<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<!-- #tablepress-7 from cache -->\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<\/p><\/div>\n<\/section>\n","protected":false},"excerpt":{"rendered":"<p> Molecular structural dataset of Deep Eutectic Solvent lignin: A computational simulation study<\/p>\n<p>&nbsp;<\/p>\n<p>Dataset of smaller lignin molecules with DP between 1 to 5, generated by simulating Deep Eutectic Solvent (DES) delignification using a computational simulation model. The simulation model derives the outcome of \u03b2-O-4 ether bond cleavage with acidic DES (Choline Chloride \/ Lactic acid) elucidating experimentally observed structural characteristics.<\/p>\n<p><img decoding=\"async\" loading=\"lazy\" class=\"wp-image-495 alignleft\" src=\"https:\/\/s3.wp.wsu.edu\/uploads\/sites\/2775\/2022\/09\/Picture1.png\" alt=\"\" width=\"667\" height=\"271\" srcset=\"https:\/\/wpcdn.web.wsu.edu\/wp-labs\/uploads\/sites\/2775\/2022\/09\/Picture1.png 593w, https:\/\/wpcdn.web.wsu.edu\/wp-labs\/uploads\/sites\/2775\/2022\/09\/Picture1-396x161.png 396w\" sizes=\"(max-width: 667px) 100vw, 667px\" \/><\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p>&nbsp;<\/p>\n<p><strong>Download<\/strong><br \/> You can download the DES lignin dataset using the links below. Molecular representations are stored in canonized &#8230; <a href=\"https:\/\/labs.wsu.edu\/pmrg\/resources\/des_lignin\/\" class=\"more-link\"><span class=\"more-default\">&raquo; More &#8230;<\/span><\/a><\/p>\n","protected":false},"author":11835,"featured_media":0,"parent":188,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"template-builder.php","meta":[],"wsuwp_university_location":[],"wsuwp_university_org":[],"_links":{"self":[{"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/pages\/493"}],"collection":[{"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/users\/11835"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/comments?post=493"}],"version-history":[{"count":9,"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/pages\/493\/revisions"}],"predecessor-version":[{"id":517,"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/pages\/493\/revisions\/517"}],"up":[{"embeddable":true,"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/pages\/188"}],"wp:attachment":[{"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/media?parent=493"}],"wp:term":[{"taxonomy":"wsuwp_university_location","embeddable":true,"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/wsuwp_university_location?post=493"},{"taxonomy":"wsuwp_university_org","embeddable":true,"href":"https:\/\/labs.wsu.edu\/pmrg\/wp-json\/wp\/v2\/wsuwp_university_org?post=493"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}