View all publications on the NIH National Library of Medicine and Google Scholar.

Preprints

• Shen, Z., Eckert, J., Saffery, R., Allen, K. J., Walsh, A., VITALITY team, … & Frischmeyer Guerrerio, P. A. (2025). Skin microbiome composition and function in the development of atopic diseases during infancy. bioRxiv, 2025-12.

Selected publications

• Che, Y., Han, J., Harkins, C. P., Hou, P., Conlan, S., Deming, C., Amirkhani, A., Bingham, M. A., Holmes, C. J., Englander, H., Shen, Z., Castelo-Soccio, L., Dimitrova, D., Kanakry, J. A., Bergerson, J. R. E., Notarangelo, L. D., Pittaluga, S., Zhao, C., Dell’Orso, S., … Kong, H. H. (2025). Restoration of the human skin microbiome following immune recovery after hematopoietic stem cell transplantation. Cell Host & Microbe, 33(8), 1412-1427.e5.
• Er, Y. X., Lee, S. C., Aneke, C., Conlan, S., Muslim, A., Deming, C., Che, Y., Yap, N. J., Tee, M. Z., Abdull-Majid, N., Shahrizal, S., Leong, K. F., Han, J., Shen, Z., Than, L. T. L., Park, M., Mohd Sayed, I., Seyedmousavi, A., Kong, H. H., … Lim, Y. A. L. (2025). Trichophyton concentricum fungal infections and skin microbiomes of Indigenous Peninsular Malaysians. Cell, 188(16), 4257-4274.e13.
• Blaustein, R. A., Shen, Z., Kashaf, S. S., Lee-Lin, S., Conlan, S., Thomas, J., Mullikin, J., Young, A., Bouffard, G., Barnabas, B., Brooks, S., Buchter, C., Crawford, J., Han, J., Ho, S., Legaspi, R., Maduro, Q., Marfani, H., Montemayor, C., … Segre, J. A. (2023). Expanded microbiome niches of RAG-deficient patients. Cell Reports Medicine, 4(10), 101205.
• Shen, Z., Robert, L., Stolpman, M., Che, Y., Allen, K. J., Saffery, R., Walsh, A., Young, A., Eckert, J., Deming, C., Chen, Q., Conlan, S., Laky, K., Li, J. M., Chatman, L., Kashaf, S. S., NISC Comparative Sequencing Program, Barnabas, B. B., Black, S., … Segre, J. A. (2023). A genome catalog of the early-life human skin microbiome. Genome Biology, 24(1), 252.