Bioinformatics
At our genomics core facility, we are dedicated to providing state-of-the-art bioinformatics services that support the research efforts of researchers at WSU. Our team is committed to helping you access advanced tools and resources for genomic analysis, ensuring your work remains at the forefront of scientific discovery.
Standard Analyses
Our well-established pipelines enable rapid results and allow us to offer transparent per-sample pricing.
Data QC and Processing: sequencing quality evaluation, read trimming and filtering
RNA-Seq: gene and transcript quantitation followed by differential expression
De Novo Assembly: assemble sequencing data into longer contigs and scaffolds
Genomic Variant Analysis: SNP and small indel discovery, genotyping, structural variation detection
Custom Analyses
To discuss your unique project needs and explore potential collaborations, please reach out for a free consultation. We can partner with you for data analysis portions of grant applications, maximizing your chances of securing funding for groundbreaking research.
Examples of some custom analyses are provided below. As we develop our analysis infrastructure, these will become standard procedures with transparent costs per sample. For more specialized or customized pipelines, we offer rates of $70/hour. We would be pleased to provide time estimates or quotes following a consultation to determine your requirements.
Whole Exome Reseq: SNP and small indel discovery
Small RNA-Seq: microRNA expression quantitation, differential expression, novel microRNA prediction
Methylation Seq: methylation site calling and annotation
Metagenomics: sequence assembly, biodiversity analysis and bining, phylogenetic analysis
Gene Functional Annotation: gene ontology (GO) analysis, enrichment, pathway, etc.
Contact
Please contact us for a free consultation. We look forward to working with you on your analysis projects.
Phone: 509-368-6668
Email: Spok.GenomicsCore@wsu.edu